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1.
Mediators Inflamm ; 2023: 7886272, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37138665

RESUMO

Objective: The aim of the present study was to compare periodontal status and antioxidant profile in unstimulated saliva of systemic sclerosis (SSc) patients with periodontitis and systemically healthy periodontitis patients. Design: Twenty patients with established diagnoses of systemic sclerosis and periodontitis (SSc group) and 20 systemically healthy individuals with periodontitis (P group) were enrolled in the study. Clinical periodontal parameters (clinical attachment level (CAL), gingival recession (GR), periodontal probing depth (PPD), and gingival index (GI)) and concentration of uric acid (UA), superoxide dismutase (SOD), and glutathione peroxidase (GPX) in unstimulated saliva samples were assessed. Results: There were significantly higher mean values of CAL (4.8 ± 0.21 mm versus 3.18 ± 0.17 mm; p ≤ 0.001) and GR (1.66 ± 0.90 mm versus 0.46 ± 0.54 mm; p ≤ 0.001) in the SSc group when compared to the P group. Significantly higher level of GPX (p ≤ 0.001) and SOD (p ≤ 0.001) in unstimulated saliva was detected in the SSc group in comparison with the P group. The specific activity of UA did not significantly differ between the two groups (p = 0.083). Conclusion: The results may indicate higher periodontal destruction and antioxidant perturbations in unstimulated saliva of SSc patients with periodontitis compared to systemically healthy periodontitis patients.


Assuntos
Periodontite Crônica , Oxirredutases , Saliva , Escleroderma Sistêmico , Humanos , Periodontite Crônica/etiologia , Saliva/química , Superóxido Dismutase , Ácido Úrico , Escleroderma Sistêmico/complicações , Escleroderma Sistêmico/patologia , Oxirredutases/análise
2.
Sci Total Environ ; 852: 158394, 2022 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-36058324

RESUMO

Extracellular polymeric substances (EPS) are high-molecular polymers secreted by microbes and play essential roles in metallic biogeochemical cycling. Previous studies demonstrated the reducing capacity of the functional groups on EPS for metal reduction. However, the roles of different EPS components in vanadium speciation and their responsible reducing substances for vanadium reduction are still unknown. In this study, the EPS of Bacillus sp. PFYN01 was fractionated via ultrafiltration into six components with different kDa (EPS>100, EPS100-50, EPS50-30, EPS30-10, EPS10-3, and EPS<3). Batch reduction experiments of the intact cells, EPS-free cells, the pristine and fractionated EPS with V5+ were conducted and characterized. The results demonstrated that the extracellular reduction of V5+ into V4+ by EPS was the major reduction process. Among the functional groups in EPS, C=O/C-N of amide in protein/polypeptide and CO of carboxyl in fulvic acid-like substances might act as the reductants for V5+, while CO in polysaccharide molecules and PO in phosphodiester played a key role in the adsorption process. The intracellular reduction was via translocating V5+ into the cells and releasing V4+ by the intracellular reductases. The reducing capacity of the fractionated EPS followed a sequence of EPS<3 > EPS10-3 > EPS50-30 > EPS100-50 > EPS30-10 > EPS>100. The small molecules of fulvic acid-like substances and amino acids were responsible for the high reducing capacity of EPS<3. EPS>100 had the lowest reducing capacity due to its macromolecular structure decreasing the exposure of the reactive sites. In addition to reduction, those intermediate EPS components may also have supporting functions, such as connecting protein skeletons and increasing the specific surface area of EPS. Therefore, the diverse effects of the EPS components cannot be neglected in vanadium biogeochemical cycling.


Assuntos
Matriz Extracelular de Substâncias Poliméricas , Vanádio , Matriz Extracelular de Substâncias Poliméricas/química , Vanádio/análise , Peso Molecular , Substâncias Redutoras/análise , Polímeros/química , Bactérias , Oxirredutases/análise , Aminoácidos/análise , Amidas
3.
Environ Monit Assess ; 194(10): 671, 2022 Aug 16.
Artigo em Inglês | MEDLINE | ID: mdl-35971006

RESUMO

The microbiological activity of three types of landfilled foundry wastes, i.e. biologically reclaimed foundry waste (BFW), foundry waste landfilled since the 1990s (LFW) and fresh foundry waste (FFW), was investigated. The wastes originated from a Polish iron and steel foundry which uses organic binders based on phenol-formaldehyde resins and mineral binders to casting production. The physical and chemical properties and dehydrogenase activity (DHA) were determined in the waste samples and local soils. In addition, a pot experiment was performed to determine the effect of the addition of FFW with no microbial activity on soils. Additional correlation analysis was conducted between DHA and other parameters. It was found that biologically reclaimed foundry waste (BFW) showed the highest microbial activity, similar to soils from garden allotments and agricultural fields. The DHA in LFW was about a half lower than BFW. On the other hand, FFW did not show any microbial activity. A pot experiment showed that increasing the percentage of foundry waste relative to soil had a negative effect on DHA, probably as a result of soil dilution rather than the inhibitory effect of contaminants. It was concluded that the optimum addition of FFW to soils is 10% wt, due to the highest value of DHA among the other variants.


Assuntos
Resíduos Industriais , Dióxido de Silício , Monitoramento Ambiental , Resíduos Industriais/análise , Oxirredutases/análise , Oxirredutases/química , Dióxido de Silício/análise , Solo , Instalações de Eliminação de Resíduos
4.
Anal Bioanal Chem ; 414(7): 2439-2452, 2022 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-35099585

RESUMO

A real-time assay for multiple enzyme activities in cascade reactions is required for research on metabolism and bioengineering. Tyrosinase has the bifunctional activity of monophenolase and diphenolase. A combined strategy of three-way calibration with excitation-emission matrix (EEM) fluorescence was developed for real-time and simultaneous determination of monophenolase and diphenolase activity with tyrosine as a substrate. Mathematical separation and second-order advantage were utilized to solve spectral overlapping and uncalibrated interferents during complex dynamic enzymatic processes. Kinetic evolution profiles of EEM were monitored to stack a fusion three-way data array together with static samples. Using a parallel factor analysis (PARAFAC) algorithm, pseudo-univariate calibration curves with limits of detection (LODs) of 3.00 µM and 0.85 µM were established to simultaneously and real-time measure tyrosine and DOPA. Progress curves for tyrosine consumption by monophenolase and DOPA consumption by diphenolase were obtained using the law of mass conservation to calculate the initial velocity. The LODs for monophenolase and diphenolase were 0.0232 U⋅mL-1 and 0.0316 U⋅mL-1. The method achieved real-time and simultaneous assays of multiple enzyme activities in cascade reactions. It showed potential application in the metabolic pathway and biochemical industry.


Assuntos
Monofenol Mono-Oxigenase , Oxirredutases , Calibragem , Catálise , Cinética , Monofenol Mono-Oxigenase/metabolismo , Oxirredutases/análise
5.
J Fluoresc ; 32(1): 381-388, 2022 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-34855074

RESUMO

Sulfhydryl oxidase was studied using a spectrofluorometric assay. The current protocol operates by using a combination of hemoglobin (HB) and hematin (HT) as a peroxidase mimic to catalyze the H2O2-dependent oxidation of thiamine. The response surface methodology (RSM) is used to optimize the new method. The current method is very accurate, sensitive, and linear up to 200 IU. When compared to the colorimetric method, the method produced a satisfactory correlation. The novel protocol is being used to evaluate asthenospermic patients' and fertile men's seminal sulfhydryl oxidase activity. The current protocol was used to determine reference values for seminal sulfhydryl oxidase activity. Due to the fact the newly developed spectrofluorometric method is more sensitive and precise than other colorimetric methods, and because thiamine is less expensive than other types of probes used in colorimetric and spectrofluorometric methods, it is likely to find widespread use among scientists studying sulfhydryl oxidase activity in biological tissues. The present method's analytical recovery yielded high specific findings.


Assuntos
Oxirredutases/análise , Espectrometria de Fluorescência/métodos , Catálise , Colorimetria/métodos , Hemina , Hemoglobinas , Peróxido de Hidrogênio , Oxirredução , Tiamina
6.
Int J Mol Sci ; 22(24)2021 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-34948092

RESUMO

Neonicotinoids (NEO) represent the main class of insecticides currently in use, with thiamethoxam (THX) and clothianidin (CLO) primarily applied agriculturally. With few comprehensive studies having been performed with non-target amphibians, the aim was to investigate potential biomarker responses along an adverse outcome pathway of NEO exposure, whereby data were collected on multiple biological hierarchies. Juvenile African clawed frogs, Xenopus laevis, were exposed to commercial formulations of THX and CLO at high (100 ppm) and low (20 ppm) concentrations of the active ingredient. Mortality, growth, development, liver metabolic enzyme activity, and gene expression endpoints were quantified. Tadpoles (n > 1000) from NF 47 through tail resorption stage (NF 66) were exposed to NEO or to NEO-free media treatments. Liver cell reductase activity and cytotoxicity were quantified by flow cytometry. Compared to control reference gene expressions, levels of expression for NEO receptor subunits, cell structure, function, and decontamination processes were measured by RT-qPCR by using liver and brain. Mortality in THX high was 21.5% compared to the control (9.1%); the metabolic conversion of THX to CLO may explain these results. The NF 57 control tadpoles were heavier, longer, and more developed than the others. The progression of development from NF 57-66 was reduced by THX low, and weight gain was impaired. Liver reductases were highest in the control (84.1%), with low NEO exhibiting the greatest reductions; the greatest cytotoxicity was seen with THX high. More transcriptional activity was noted in brains than in livers. Results affirm the utility of a study approach that considers multiple complexities in ecotoxicological studies with non-target amphibians, underscoring the need for simultaneously considering NEO concentration-response relationships with both whole-organism and biomarker endpoints.


Assuntos
Encéfalo/efeitos dos fármacos , Expressão Gênica , Guanidinas/farmacologia , Fígado/efeitos dos fármacos , Neonicotinoides/farmacologia , Oxirredutases/análise , Tiametoxam/farmacologia , Tiazóis/farmacologia , Animais , Encéfalo/metabolismo , Guanidinas/toxicidade , Fígado/enzimologia , Fígado/metabolismo , Metamorfose Biológica , Neonicotinoides/toxicidade , Tiametoxam/toxicidade , Tiazóis/toxicidade , Xenopus laevis/genética , Xenopus laevis/metabolismo
7.
Clin Epigenetics ; 13(1): 137, 2021 07 02.
Artigo em Inglês | MEDLINE | ID: mdl-34215320

RESUMO

BACKGROUND: The role of epigenetics in inborn errors of metabolism (IEMs) is poorly investigated. Epigenetic changes can contribute to clinical heterogeneity of affected patients but could also be underestimated determining factors in the occurrence of IEMs. An epigenetic cause of IEMs has been recently described for the autosomal recessive methylmalonic aciduria and homocystinuria, cblC type (cblC disease), and it has been named epi-cblC. Epi-cblC has been reported in association with compound heterozygosity for a genetic variant and an epimutation at the MMACHC locus, which is secondary to a splicing variant (c.515-1G > T or c.515-2A > T) at the adjacent PRDX1 gene. Both these variants cause aberrant antisense transcription and cis-hypermethylation of the MMACHC gene promotor with subsequent silencing. Until now, only nine epi-cblC patients have been reported. METHODS: We report clinical/biochemical assessment, MMACHC/PRDX1 gene sequencing and genome-wide DNA methylation profiling in 11 cblC patients who had an inconclusive MMACHC gene testing. We also compare clinical phenotype of epi-cblC patients with that of canonical cblC patients. RESULTS: All patients turned out to have the epi-cblC disease. One patient had a bi-allelic MMACHC epimutation due to the homozygous PRDX1:c.515-1G > T variant transmitted by both parents. We found that the bi-allelic epimutation produces the complete silencing of MMACHC in the patient's fibroblasts. The remaining ten patients had a mono-allelic MMACHC epimutation, due to the heterozygous PRDX1:c.515-1G > T, in association with a mono-allelic MMACHC genetic variant. Epi-cblC disease has accounted for about 13% of cblC cases diagnosed by newborn screening in the Tuscany and Umbria regions since November 2001. Comparative analysis showed that clinical phenotype of epi-cblC patients is similar to that of canonical cblC patients. CONCLUSIONS: We provide evidence that epi-cblC is an underestimated cause of inborn errors of cobalamin metabolism and describe the first instance of epi-cblC due to a bi-allelic MMACHC epimutation. MMACHC epimutation/PRDX1 mutation analyses should be part of routine genetic testing for all patients presenting with a metabolic phenotype that combines methylmalonic aciduria and homocystinuria.


Assuntos
Erros Inatos do Metabolismo/genética , Oxirredutases/análise , Peroxirredoxinas/análise , Vitamina B 12/metabolismo , Metilação de DNA/genética , Feminino , Humanos , Recém-Nascido , Masculino , Erros Inatos do Metabolismo/etiologia , Triagem Neonatal/métodos
8.
J Invest Dermatol ; 141(11): 2679-2689, 2021 11.
Artigo em Inglês | MEDLINE | ID: mdl-34029574

RESUMO

Opsin-3 (OPN3) is a potential key regulator of human melanocyte melanogenesis. How OPN3-mediated regulation of melanocyte melanogenesis is triggered is largely unclear. TGFß can inhibit the growth of human melanocytes and reduce melanin synthesis in melanocytes. However, whether TGFß2 can modulate pigmentation in normal human primary melanocytes through OPN3 is entirely unknown. In this study, we constructed a coculture model with human epidermal melanocytes and keratinocytes. OPN3, tyrosinase (TYR), tyrosinase-related protein (TRP)-1, and TRP-2 expression and TYR activity were detected to be higher in cocultured cells than in monocultured cells. Moreover, elevated levels of TGFß2 were detected in the culture supernatant of melanocytes cocultured with keratinocytes. OPN3 inhibition in melanocytes decreased TYR, TRP-1, and TRP-2 expression and downregulated TYR activity. Our findings indicate that TGFß2 upregulates TYR activity and TRP-1 and TRP-2 expression in human melanocytes through OPN3 and downstream calcium-dependent G-protein coupled signaling pathways to induce melanogenesis. Interestingly, treatment with the TGFß2 receptor inhibitor LY2109761 (10 µM) did not inhibit TGFß2-induced melanocyte melanogenesis though OPN3. Collectively, our data suggest that TGFß2 upregulates TYR activity through OPN3 through a TGFß2 receptor-independent and calcium-dependent G-protein coupled signaling pathway.


Assuntos
Melanócitos/metabolismo , Monofenol Mono-Oxigenase/metabolismo , Opsinas de Bastonetes/fisiologia , Fator de Crescimento Transformador beta2/fisiologia , Células Cultivadas , Criança , Pré-Escolar , Técnicas de Cocultura , Humanos , Oxirredutases Intramoleculares/análise , Queratinócitos/metabolismo , Oxirredutases/análise , Transdução de Sinais/fisiologia , Regulação para Cima
9.
Biomed Res Int ; 2021: 5568845, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33981770

RESUMO

The flora compositions of nitrogen-fixing bacteria in roots of Pennisetum giganteum z.x.lin at different growth stages and the expression and copy number of nitrogen-fixing gene nifH were studied by Illumina Miseq second-generation sequencing technology and qRT-PCR. The results showed that there were more than 40,000~50,000 effective sequences in 5 samples from the roots of P. giganteum, with Proteobacteria and Cyanobacteria as the dominant nitrogen-fixing bacteria based on the OTU species annotations for each sample and Bradyrhizobium as the core bacterial genera. The relative expression and quantitative change of nifH gene in roots of P. giganteum at different growth stages were consistent with the changes in the flora compositions of nitrogen-fixing microbia. Both revealed a changing trend with an initial increase and a sequential decrease, as well as changing order as jointing stage>maturation stage>tillering stage>seedling stage>dying stage. The relative expression and copy number of nifH gene were different in different growth stages, and the difference among groups basically reached a significant level (p < 0.05). The relative expression and copy number of nifH gene at the jointing stage were the highest, and the 2-△△CT value was 4.43 folds higher than that at the seedling stage, with a copy number of 1.32 × 107/g. While at the dying stage, it was the lowest, and the 2-△△CT value was 0.67 folds, with a copy number of 0.31 × 107/g.


Assuntos
Proteínas de Bactérias , Bactérias Fixadoras de Nitrogênio , Oxirredutases , Pennisetum/microbiologia , Raízes de Plantas/microbiologia , Proteínas de Bactérias/análise , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Dosagem de Genes/genética , Genes Bacterianos/genética , Bactérias Fixadoras de Nitrogênio/classificação , Bactérias Fixadoras de Nitrogênio/genética , Bactérias Fixadoras de Nitrogênio/metabolismo , Oxirredutases/análise , Oxirredutases/genética , Oxirredutases/metabolismo , Microbiologia do Solo
10.
Anal Bioanal Chem ; 413(2): 635-647, 2021 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-33159571

RESUMO

Tyrosinase is the key enzyme for the metabolism of tyrosine and inherently comprises both monophenolase activity and diphenolase activity. A real-time fluorometric assay method was established to exclusively monitor the monophenolase activity by eliminating interference from diphenolase reactions through a combination of borate and hydroxylamine. Synthetic matrices comprised of tyrosine and DOPA (L-3,4-dihydroxyphenylalanine) preincubated with tyrosinase with the consistent sum concentration of 70 µM to mimic the monophenolase reaction mixture in borate buffer according to law of mass conservation. A matrix-matched calibration curve for determination of tyrosine was established using the synthetic matrices as standard sample to eliminate spectral interference from DOPA. The limit of detection (LOD) for tyrosine was 0.61 µM. The time course for consumption of tyrosine was established to measure the initial velocity through real-time reading out the tyrosine fluorescence intensity of the reaction mixture in a cuvette in situ. The assay worked in the monophenolase activity range from 0.2839 to 1.7308 U mL-1 with LOD of 0.0851 U mL-1. The proposal sensing system successfully afforded a prospective potential for application in enzyme kinetics and screening of inhibitor. Graphical abstract.


Assuntos
Calibragem , Di-Hidroxifenilalanina/análise , Fluorometria/métodos , Oxirredutases/análise , Tirosina/análise , Domínio Catalítico , Técnicas de Química Analítica , Cromatografia Líquida de Alta Pressão , Cromatografia Líquida , Inibidores Enzimáticos/química , Cinética , Limite de Detecção , Monofenol Mono-Oxigenase/química , Oxirredução , Reprodutibilidade dos Testes , Fatores de Tempo
11.
Poult Sci ; 99(11): 5874-5882, 2020 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-33142505

RESUMO

The present study evaluated the effects of natural astaxanthin (ASTA) from Haematococcus pluvialis on the antioxidant capacity, lipid metabolism, and ASTA accumulation in the egg yolk of laying hens. Hy-Line Brown layers (n = 288, 50 wk old) were randomly assigned to 1 of 4 dietary treatment groups. Each group had 6 replicates of 12 hens each. All birds were given a corn-soybean meal-based diet containing 0, 25, 50, or 100 mg/kg ASTA for 6 wk. The results showed that the total antioxidant capacity, superoxide dismutase level, and glutathione peroxidase level in the plasma, livers, and egg yolks were significantly increased in the ASTA groups compared with those of the control group (P < 0.05), whereas the content of malondialdehyde linearly decreased (P < 0.05). The plasma levels of high-density and very-low-density lipoprotein cholesterol in the ASTA groups were significantly higher than those in the control group (P < 0.05). In addition, ASTA supplementation decreased low-density lipoprotein cholesterol and triglyceride plasma levels (P < 0.05). However, there were no significant differences in the other lipid metabolism parameters among the ASTA-supplemented groups relative to the control group except for an increase in high-density lipoprotein cholesterol in the liver. Compared with the control, dietary ASTA supplementation significantly increased the enrichment of ASTA in egg yolks at the end of week 2, 4, and 6 (P < 0.05). The mRNA expression of scavenger receptor class B type 1 (SCARB1) and very-low-density lipoprotein receptor (VLDLR) in the ASTA groups was markedly higher (P < 0.05) than that in the control group in the liver and ovaries, respectively. In conclusion, these results suggest that dietary ASTA enhances the antioxidant capacity and regulates lipid metabolism in laying hens. ASTA enrichment in egg yolks may be closely related to the upregulation of SCARB1 and VLDLR gene expression.


Assuntos
Suplementos Nutricionais , Gema de Ovo , Metabolismo dos Lipídeos , Oxirredutases , Ração Animal/análise , Animais , Antioxidantes , Galinhas , Clorofíceas/química , Dieta/veterinária , Gema de Ovo/química , Gema de Ovo/enzimologia , Gema de Ovo/metabolismo , Feminino , Metabolismo dos Lipídeos/efeitos dos fármacos , Oxirredutases/análise , Oxirredutases/sangue , Distribuição Aleatória , Xantofilas/farmacologia
12.
Ecotoxicol Environ Saf ; 206: 111405, 2020 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-33010592

RESUMO

Soils might be a final sink for Ag2S nanoparticles (NPs). Still, there are limited data on their effects on soil bacterial communities (SBC). To bridge this gap, we investigated the effects of Ag2S NPs (10 mg kg-1 soil) on the structure and function of SBC in a terrestrial indoor mesocosm, using a multi-species design. During 28 days of exposure, the SBC function-related parameters were analysed in terms of enzymatic activity, community level physiological profile, culture of functional bacterial groups [phosphorous-solubilizing bacteria (P-SB) and heterotrophic bacteria (HB)], and SBC structure was analysed by 16S rRNA gene-targeted denaturing gradient gel electrophoresis. The SBC exposed to Ag2S NPs showed a significative decrease of functional parameters, such as ß-glucosidase activity and L-arginine consumption, and increase of the acid phosphatase activity. At the structural level, significantly lower richness and diversity were detected, but at later exposure times compared to the AgNO3 treatment, likely because of a low dissolution rate of Ag2S NPs. In fact, stronger effects were observed in soils spiked with AgNO3, in both functional and structural parameters. Changes in SBC structure seem to negatively correlate with parameters related to phosphorous (acid phosphatase activity) and carbon cycling (abundance of HB, P-SB, and ß-glucosidase activity). Our results indicate a significant effect of Ag2S NPs on SBC, specifically on parameters related to carbon and phosphorous cycling, at doses as low as 10 mg kg-1 soil. These effects were only observed after 28 days, highlighting the importance of long-term exposure experiments for slowly dissolving NPs.


Assuntos
Nanopartículas Metálicas/toxicidade , Microbiota/efeitos dos fármacos , Compostos de Prata/toxicidade , Microbiologia do Solo , Poluentes do Solo/toxicidade , Solo/química , Fosfatase Ácida/análise , Microbiota/genética , Oxirredutases/análise , RNA Ribossômico 16S , Poluentes do Solo/análise , beta-Glucosidase/análise
13.
Cancer Med ; 9(16): 5719-5730, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32946170

RESUMO

Based on accumulating evidence, long noncoding RNAs (lncRNAs) are potential biomarkers and therapeutic targets for many diseases, including tumors. In this study, we consulted The Cancer Genome Atlas (TCGA) database to explore the functions and modulatory mechanisms of lncRNAs as competing endogenous RNAs (ceRNAs) in hepatocellular carcinoma (HCC) in Asian patients and constructed a risk scoring system composed of four lncRNAs (SNHG1, STEAP3-AS1, RUSC1-AS1, and SNHG3) to predict the outcomes of Asian patients with HCC. The prognostic value of this risk model was validated in the internal validation cohort (n = 157). The stratified survival analysis revealed good performance for the risk model in stratifying clinical features. According to the Cox proportional hazard regression analysis, the four-lncRNA risk model is an independent prognostic model for Asian patients with HCC. Finally, we developed a nomogram that integrates prognostic signals and other clinical information to predict 1-, 3-, and 5-year overall survival rates. In conclusion, the prognostic lncRNAs identified in our study exerted potential biological effects on the development of HCC. The risk scoring model based on four lncRNAs may be an effective classification tool for assessing the prognosis of Asian patients with HCC.


Assuntos
Proteínas Adaptadoras de Transdução de Sinal/análise , Carcinoma Hepatocelular/mortalidade , Proteínas de Ciclo Celular/análise , Neoplasias Hepáticas/mortalidade , Oxirredutases/análise , RNA Longo não Codificante/análise , Povo Asiático , Carcinoma Hepatocelular/química , Carcinoma Hepatocelular/etnologia , Feminino , Humanos , Neoplasias Hepáticas/química , Neoplasias Hepáticas/etnologia , Masculino , MicroRNAs/análise , Pessoa de Meia-Idade , Prognóstico , RNA Mensageiro/análise , Análise de Sobrevida , Taxa de Sobrevida
14.
Protein Eng Des Sel ; 332020 09 14.
Artigo em Inglês | MEDLINE | ID: mdl-32930800

RESUMO

Accurate yet efficient high-throughput screenings have emerged as essential technology for enzyme engineering via directed evolution. Modern high-throughput screening platforms for oxidoreductases are commonly assisted by technologies such as surface display and rely on emulsification techniques to facilitate single-cell analysis via fluorescence-activated cell sorting. Empowered by the dramatically increased throughput, the screening of significantly larger sequence spaces in acceptable time frames is achieved but usually comes at the cost of restricted applicability. In this work, we tackle this problem by utilizing roGFP2-Orp1 as a fluorescent one-component detection system for enzymatic H2O2 formation. We determined the kinetic parameters of the roGFP2-Orp1 reaction with H2O2 and established an efficient immobilization technique for the sensor on Saccharomyces cerevisiae cells employing the lectin Concanavalin A. This allowed to realize a peroxide-sensing shell on enzyme-displaying cells, a system that was successfully employed to screen for H2O2 formation of enzyme variants in a whole-cell setting.


Assuntos
Proteínas de Fluorescência Verde/química , Peróxido de Hidrogênio/química , Oxirredutases/análise , Proteínas Recombinantes de Fusão/química , Proteínas de Saccharomyces cerevisiae/análise , Saccharomyces cerevisiae/enzimologia
15.
Pak J Biol Sci ; 23(7): 940-945, 2020 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-32700842

RESUMO

BACKGROUND AND OBJECTIVE: The dairy industry in Saudi Arabia is producing huge quantity of Farm Yard Manure (FYM) resulting in potential environmental and health hazards. Raw FYM is processed into usable compost for increasing soil fertility and productivity. The main aim of this study was to analyze the effect of prepared Cow Manure Compost (CMC) on chemical and microbiological soil properties. MATERIALS AND METHODS: A greenhouse experiment was carried out with 3 CMC treatments (control, 25 and 50 t ha-1). The plot size was 2×2 m2 with three replications and the test crop was corn (Zea mays, an American hybrid cultivar). The irrigation source was deep well water. Crop growth parameters, such as plant height and fresh biomass were determined. The microbiological soil properties measured were Soil Microbial Biomass (SMB), Microbial Nitrogen (MN), Dehydrogenase Activity (DHA) and Alkaline Phosphomonoesterase Activity (APA). Standard analytical methods were used for soil analysis and microbiological investigation. RESULTS: Addition of CMC increased significantly the mean plant height and fresh biomass. The microbial parameters such as SMB, MN, APA and DHA improved and depended on the doses application. CONCLUSION: The study results showed that the use of CMC improved the soil microbiological properties thus resulting in improved crop production.


Assuntos
Compostagem , Esterco , Microbiologia do Solo , Solo/química , Animais , Biomassa , Bovinos , Produtos Agrícolas/crescimento & desenvolvimento , Nitrogênio/análise , Oxirredutases/análise , Arábia Saudita , Zea mays/crescimento & desenvolvimento
16.
Appl Environ Microbiol ; 86(16)2020 08 03.
Artigo em Inglês | MEDLINE | ID: mdl-32503911

RESUMO

Traditional fermentations have been widely studied from the microbiological point of view, but little is known from the functional perspective. In this work, nitrogen fixation by free-living nitrogen-fixing bacteria was conclusively demonstrated in pozol, a traditional Mayan beverage prepared with nixtamalized and fermented maize dough. Three aspects of nitrogen fixation were investigated to ensure that fixation actually happens in the dough: (i) the detection of acetylene reduction activity directly in the substrate, (ii) the presence of potential diazotrophs, and (iii) an in situ increase in acetylene reduction by inoculation with one of the microorganisms isolated from the dough. Three genera were identified by sequencing the 16S rRNA and nifH genes as Kosakonia, Klebsiella, and Enterobacter, and their ability to fix nitrogen was confirmed.IMPORTANCE Nitrogen-fixing bacteria are found in different niches, as symbionts in plants, in the intestinal microbiome of several insects, and as free-living microorganisms. Their use in agriculture for plant growth promotion via biological nitrogen fixation has been extensively reported. This work demonstrates the ecological and functional importance that these bacteria can have in food fermentations, reevaluating the presence of these genera as an element that enriches the nutritional value of the dough.


Assuntos
Acetileno/metabolismo , Bactérias/metabolismo , Enterobacteriaceae/metabolismo , Alimentos Fermentados/microbiologia , Fixação de Nitrogênio , Enterobacter/isolamento & purificação , Enterobacter/metabolismo , Enterobacteriaceae/isolamento & purificação , Klebsiella/isolamento & purificação , Klebsiella/metabolismo , México , Oxirredução , Oxirredutases/análise , RNA Bacteriano/análise , RNA Ribossômico 16S/análise
17.
Chembiochem ; 21(14): 1968-1971, 2020 07 16.
Artigo em Inglês | MEDLINE | ID: mdl-31994801

RESUMO

Ion mobility spectrometry (IMS) coupled with mass spectrometry (MS) enables the investigation of protein folding in solution. Herein, a proof-of-concept for obtaining structural information about the folding of a protein in dependency of the amount of an organic cosolvent in the aqueous medium by means of this IMS-MS method is presented. By analyzing the protein with native nano-electrospray ionization IMS-MS, the impact of acetonitrile as a representative organic cosolvent and/or pH values on the folding of an enzyme was successfully evaluated in a fast and straightforward fashion, as exemplified for an ene reductase from Gluconobacter oxydans. The IMS-MS results are in agreement with findings from the nicotinamide adenine dinucleotide phosphate (NADPH)-based spectrophotometric enzyme activity tests under analogous conditions, and thus, also rationalizing these "wet" analytical data. For this ene reductase, a higher tolerance against CH3 CN in the presence of a buffer was observed by both analytical methods. The results suggest that this IMS-MS methodology could be a useful complementary tool to existing methods in process optimization and fine-tuning of solvent conditions for biotransformations.


Assuntos
Acetonitrilas/farmacologia , Oxirredutases/metabolismo , Acetonitrilas/química , Estabilidade Enzimática/efeitos dos fármacos , Gluconobacter oxydans/enzimologia , Concentração de Íons de Hidrogênio , Espectrometria de Mobilidade Iônica , Espectrometria de Massas , Oxirredutases/análise , Dobramento de Proteína/efeitos dos fármacos , Solventes/química , Solventes/farmacologia
18.
Chembiochem ; 21(6): 797-800, 2020 03 16.
Artigo em Inglês | MEDLINE | ID: mdl-31587437

RESUMO

Uronic acid-rich plant materials such as pectin are potential renewable feedstocks for the chemical industry. Uronic acid oxidase activity was first reported in extracts of citrus leaves, and was subsequently found to be widely distributed in plants, with the highest activity detected in extracts of the pectin-rich citrus peel. Herein we report the identification of the primary sequence of uronic acid oxidase from extracts of the peel of Citrus sinensis, by partial purification and protein mass spectrometry. Activity of the enzyme, a member of the berberine bridge family, was confirmed by recombinant expression in Pichia pastoris. Biochemical characterization of the recombinant enzyme is reported. Our findings facilitate further investigation of the biological function of uronic acid oxidation in the economically important orange fruit, and also provide a basis for the development of a catalyst for bioconversion of uronic acids.


Assuntos
Citrus sinensis/enzimologia , Oxirredutases/análise , Ácidos Urônicos/análise , Oxirredução , Oxirredutases/metabolismo , Ácidos Urônicos/metabolismo
19.
Chemosphere ; 241: 125006, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31590016

RESUMO

The use of ornamental plant will increase with the improvement in living standards in green and blue-green infrastructure of urban settings. Nicotiana alata is an ornamental plant, frequently grown as a model plant for horticulture, medicine, and scientific research studies throughout the world. Despite its popularity, little is known about the response of N. alata against heavy metals (HMs). This work is based on the hydroponic study to identify the impacts of selected HMs (Cd, Cr, Cu, Ni and Pb) on N. alata, at 0, 50 and 100 µM concentration, with the co-application of EDTA, at 0 and 2.5 mM in hydroponics system. The HMs uptake was found to be dose dependent, with significant higher uptake at 100 µM of respective HM. Highest cumulative uptake (mg kg-1 of HMs in root, shoot, and leaf dried weight) noted were 767.50 ±â€¯50.83, 862.30 ±â€¯23.83, 271.29 ±â€¯18.68, 1117.49 ±â€¯46.10 and 2166.81 ±â€¯102.09, for Cd, Cr, Cu, Ni, and Pb at 100 µM, respectively. It was identified that EDTA co-application with HMs resulted in boosted HMs uptake, with cumulative uptake percentage increment of 41.62, 54.67, 53.98, 34.48 and 19.92% for 100 µM of Cd, Cr, Cu, Ni, and Pb, respectively. Higher uptake led to negative impact on plant physiology, photosynthetic pigments, and higher lipid peroxidation, H2O2 contents, and electrolyte leakage that increased the stress. Higher HMs uptake induced higher antioxidant enzymatic response. It is recommended to incorporate appropriate soil modification to grow N. alata in sustainable infrastructures.


Assuntos
Ácido Edético/farmacologia , Metais Pesados/farmacocinética , /metabolismo , Poluentes do Solo/farmacocinética , Peróxido de Hidrogênio/análise , Metais Pesados/análise , Oxirredutases/análise , Folhas de Planta/metabolismo , Raízes de Plantas/metabolismo , Poluentes do Solo/análise
20.
JBRA Assist Reprod ; 24(1): 41-54, 2020 01 30.
Artigo em Inglês | MEDLINE | ID: mdl-31608617

RESUMO

OBJECTIVES: Polycystic ovary syndrome (PCOS) represents 75% of the cases of anovulatory infertility. The aim of this study was to investigate the role of aspirin on dehydroepiandrosterone (DHEA) - induced polycystic ovary syndrome in Wistar rats. METHODS: Twenty eight (28) pre-pubertal female Wistar rats of 21 days old weighing 16 - 21 g were divided into 4 groups (7 rats/group) and treated as follows; group I received distilled water and served as Control; Group II received 6 mg/100 g body weight DHEA in 0.2 ml of oil subcutaneously to induce PCOS. Group III received 7.5 mg/kg of aspirin orally; Group IV received 6 mg/100kg of body weight of DHEA in 0.2ml of oil subcutaneously and 7.5 mg/kg of aspirin orally. After 15 days of administration, the rats were slaughtered by cervical dislocation. Blood samples and ovaries were collected for reproductive hormonal analysis, biochemical and histopathological analysis. The expressions of mRNA androgen receptor (AR) gene in the ovary were determined by real time reverse transcriptase polymerase chain reaction (qPCR). All the data was analyzed using one way ANOVA with the Graph pad prism software version 6. A p<0.05 was considered significant. RESULTS: The results obtained showed that dehydroepiandrosterone treatment caused significant decrease (p<0.05) in total protein, superoxide Dismutase (SOD), glutathione-s- transferase (GST), Ca2+ ATPase, and significant increase (p<0.05) in malondialdehyde, vascular endothelial growth factor, tumor necrosis factor and estrogen as compared to Controls. The group co-administered with DHEA and aspirin showed significant increases in SOD, GST, CAT, GSH, Progesterone, Ca2+ ATPase, Na+ ATPase, H+ ATPase and significant reduction (p<0.05) in malondialdehyde, VEGF, TNF-α and estrogen as compared with the DHEA group. The histopathological analysis showed reductions in cystic fibrosis, atretic ovaries, increased expression of Bcl-2 and E- Cadherin and reduced Bax expression in the group that received Aspirin and DHEA. CONCLUSION: This study clearly demonstrates that Aspirin has ameliorating effects against polycystic ovary syndrome via anti-inflammatory and hormonal modulatory pathways.


Assuntos
Aspirina/farmacologia , Desidroepiandrosterona/efeitos adversos , Ovário/efeitos dos fármacos , Síndrome do Ovário Policístico , Animais , Antioxidantes/análise , Antioxidantes/metabolismo , Citocinas/análise , Citocinas/metabolismo , Feminino , Ovário/citologia , Ovário/metabolismo , Estresse Oxidativo/efeitos dos fármacos , Oxirredutases/análise , Oxirredutases/metabolismo , Síndrome do Ovário Policístico/induzido quimicamente , Síndrome do Ovário Policístico/metabolismo , Ratos , Ratos Wistar
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